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Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: Stability, structure, and dynamics of axial ligand complexes

机译:硝化蛋白远端口袋突变体的电化学和NMR光谱研究2:轴向配体配合物的稳定性,结构和动力学

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摘要

WT and leucine → valine distal pocket mutants of nitrophorin 2 (NP2) and their NO complexes have been investigated by spectroelectrochemistry. NO complexes of two of the mutants exhibit more positive reduction potential shifts than does the WT protein, thus indicating stabilization of the Fe(II)–NO state. This more positive reduction potential for NP2-L132V and the double mutant is consistent with the hypothesis that smaller valine residues may allow the heme to regain planarity instead of being significantly ruffled, as in WT NP2. Thus, ruffling may stabilize the Fe(III)–NO state, which is required for facile NO dissociation. NMR spectroscopic investigations show that the sterically demanding 2-methylimidazole ligand readily binds to all three distal pocket mutants to create low-spin Fe(III) complexes having axial ligands in nearly perpendicular planes; it also binds to the WT protein in the presence of higher concentrations of 2-methylimidazole, but yields a different ligand plane orientation than is present in any of the three distal pocket mutants. NOESY spectra of NP2–ImH mutants exhibit chemical exchange cross peaks, whereas WT NP2–ImH shows no chemical exchange. Chemical exchange in the case of the distal leucine → valine mutants is caused by ImH ligand orientational dynamics. The two angular orientations of the ImH ligand could be determined from the 1H chemical shifts of the heme methyls, and the rate of interconversion of the two forms could be estimated from the NOESY diagonal and cross peak intensities. Keq is 100 or larger and favors an orientation similar to that found for the WT NP2–ImH complex.
机译:WT和亮氨酸→缬氨酸的远侧口袋突变体的nitrophorin 2(NP2)及其NO配合物已通过光谱电化学进行了研究。两个突变体的NO配合物比WT蛋白表现出更多的正还原电位偏移,因此表明Fe(II)-NO状态稳定。 NP2-L132V和双重突变体具有更大的正还原潜力,这一假设与较小的缬氨酸残基可以使血红素恢复平面性而不是像WT NP2那样被显着皱纹的假设一致。因此,起皱可以稳定Fe(III)-NO态,这是便捷的NO分解所必需的。 NMR光谱研究表明,对空间要求高的2-甲基咪唑配体易于与所有三个远端口袋突变体结合,从而形成低旋转的Fe(III)配合物,该配合物在几乎垂直的平面上具有轴向配体。在存在更高浓度的2-甲基咪唑的情况下,它也与WT蛋白结合,但是产生的配体平面取向不同于三个远端口袋突变体中任何一个的配体平面取向。 NP2-ImH突变体的NOESY光谱显示出化学交换交叉峰,而WT NP2-ImH突变体没有化学交换。在远端亮氨酸→缬氨酸突变体的情况下,化学交换是由ImH配体定向动力学引起的。 ImH配体的两个角取向可以通过血红素甲基的1H化学位移来确定,两种形式的相互转化率可以通过NOESY对角线和交叉峰强度来估计。 Keq为100或更大,其取向与WT NP2-ImH复合物相似。

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